Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888926.1_cds_XP_016443577.1_38722
CDS Infomation

[gene=LOC107768919] [db_xref=GeneID:107768919] [protein=homeobox-DDT domain protein RLT1-like isoform X2] [protein_id=XP_016443577.1] [location=complement(join(26780..26875,26969..27052,27126..27596,28479..28558,29537..30116,30281..30370))] [gbkey=CDS]
Sequence

ATGACAAAGGTCATACTGAAAAAAACAAGACAAGAATCAAGGTCATCAAGACACGTGCTC
AGATTGAAGGCCTGGAGAAATTTTACAAGGGTTTCTGGGTGGTTTTGTCATAGGCGCTTG
AAAGACAAGAGGCTATTAAGTCGGGAAACATATGCAAATGGAAGACAAGATCGTTCAAGT
GGTGTCATTCAGGACCGTGGCAGCGGTTTTAGGCAGGATTCTTGCGGAAGTACTAAGCAA
GGAGATGATAAGAATTTTGATCATCGGGAAGTTGAGAGTAGAAGGTTAACTGCCCCAGAA
GTCTCAGCTGCGGGTGTTACATATGAAGTTGGTACTCAGTATAGAGCAAAGTCTAATCTC
ATGGAGGATACACCTTCAGGAAGTAGCTCTTCCTTACGTGATGCATGTTTTTCACGAAAT
GTGGAATCATTTGATATGGCAACATCGAGATACCTATCGTCTGATGTACCCACTGATCTT
AAGAGTGTGAAACCAAGAACTGGCCCATCCGGGTACTTAAAAGTGAAAGGCCAGGTAGAA
AATGCTGCAATTACTGCTGTGAAGAGGCAATTGGGAAGTCTCTACCGACAGGATGGTCCA
CCACTTGGTGTTGAATTTGATCCACTTCCACCTGGTGCTTTTGAATCATCAGTGCAAAAT
CTTGTTGATGAACCTGAATATGCTGGAGAACCTGTTCCAGCTCTTACACCAGATTTCTCT
AAAGTGTACAAGCAATCGAATTCATGCATAGGACATGGATCCATTTCCAAGACAAACTCT
CATGTCCCTAATTTGGAAGGTGCAAGTTTCAAAAAATCACTCAAGTCTGCTCATCCCGAA
TATTACTTCAACGAAAAGCCTGGTCAGAATTCCTCTATTCATGATGGTGATTGTTACTAT
CTTGGGCGGGACTCGTCAATAGACATGCACAAAGGTTCTGGAAGAGAAGTGGCGGTTGAT
GGCAGATGCAACTATAAGTATATGGCTAAACATGATGGTGCAGAAATTAGAACTAATACT
AGCTCTAGCAGTGGTTTTCGAAGTCCCCGCACTGGAAAAGTCAATGGGGAGCAGGTGAAG
CCTAGGTTCACTAGCTGCAATGAAACGAACCTTAAGATTATGGAGGAGGAAGATCTTGAA
CGCAAGCCTTCAAATTTTGTCCTGAAGGGAAGTAAGCATCGTTATTGTCCAGAGAGAGTG
CTCTCCAGTAAAGTTGAAAAGGATTACATCCATGTGGACAGACCACCAGTTGATGAAAAC
TATAATCTGGATCGCGTGAAGATACCCTGGGAGAATGAAATGAGGGCTGCCAAAAGAGCA
AGGGATGAAGACCCTAATCATCAAGAATATCCGAGGAATGCATCAGGGACACAATGCCAT
CCCAGACAAATCATCAGATGA

Peptide Sequence

PEP ID

XP_016443577.1
PEP Infomation

PREDICTED: homeobox-DDT domain protein RLT1-like isoform X2 [Nicotiana tabacum]
Sequence

MTKVILKKTRQESRSSRHVLRLKAWRNFTRVSGWFCHRRLKDKRLLSRETYANGRQDRSS
GVIQDRGSGFRQDSCGSTKQGDDKNFDHREVESRRLTAPEVSAAGVTYEVGTQYRAKSNL
MEDTPSGSSSSLRDACFSRNVESFDMATSRYLSSDVPTDLKSVKPRTGPSGYLKVKGQVE
NAAITAVKRQLGSLYRQDGPPLGVEFDPLPPGAFESSVQNLVDEPEYAGEPVPALTPDFS
KVYKQSNSCIGHGSISKTNSHVPNLEGASFKKSLKSAHPEYYFNEKPGQNSSIHDGDCYY
LGRDSSIDMHKGSGREVAVDGRCNYKYMAKHDGAEIRTNTSSSSGFRSPRTGKVNGEQVK
PRFTSCNETNLKIMEEEDLERKPSNFVLKGSKHRYCPERVLSSKVEKDYIHVDRPPVDEN
YNLDRVKIPWENEMRAAKRARDEDPNHQEYPRNASGTQCHPRQIIR

Transcript Sequence

Gene sequence data has not been registered.